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Category Archives: ELIXIR

ELIXIR teams up with The Carpentries to boost its training programme

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ELIXIR and The Carpentries initiative, a merged organization of Software Carpentry and Data Carpentry, have agreed to extend their collaboration in organising and delivering training in ELIXIR Nodes. As part of the collaboration, The Carpentries will organise close to 20 Software and Data Carpentry training workshops across ELIXIR Nodes, and two Instructor Training workshops to train a number of specialised instructors. This… Continue reading →

2 October: Lab in the Clouds workshop at DTL Communities@Work

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Dr Irene Nooren (SURF) and Dr Arnoud van der Maas (Radboudumc, ELIXIR-NL) will organise a workshop ‘Lab in the Clouds: the cloud as your research environment’ at the DTL Communities@Work conference on 2 October 2018 in Utrecht. SURF and ELIXIR-NL are involved as co-organisers. Current cloud technology makes it possible to build your own virtual research environment using public or private cloud ICT infrastructure… Continue reading →

2 October: Omics data infrastructure workshop at DTL Communities@Work

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Professor Peter-Bram ‘t Hoen (Radboudumc) and Professor Morris Swertz (UMC Groningen and Groningen University) will organise a workshop ‘Shaping the national digital infrastructure for large (cross-)omics projects’ at the DTL Communities@Work conference on 2 October 2018 in Utrecht. The Netherlands X-omics Initiative, ELIXIR-NL, and Health-RI are involved as co-organisers. Are you active in (cross-)omics research projects in the life sciences (e.g.,… Continue reading →

ELIXIR-NL course: Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!

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Galaxy is an open, web-based platform for data-intensive biomedical research. On 17-19 October 2018, ELIXIR-NL and the BioSB research school will organise a Galaxy course ‘Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!’ The course is meant for biomedical & translational medicine researchers who are keen on bioinformatics and for educators in the ‘bio domain’ who would like… Continue reading →

Toxicology data management tutorials automatically collected by European training portal TeSS

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A team including Egon Willighagen from Maastricht University, Niall Beard from ELIXIR’s TeSS team, and Oana Florean from Douglas Connect (coordinator of OpenRiskNet) has used BioSchemas to create a system that automatically pulls toxicology-related training materials from the eNanoMapper project into the European training portal TeSS. TeSS is ELIXIR’s training portal. It provides trainers and trainees with training materials, events… Continue reading →

New Implementation Study will facilitate FAIR Data Management & Analysis

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ELIXIR-NL will coordinate a new Implementation Study that aims to deliver a user-friendly FAIR Data management & analysis application as an EU cloud service: ‘myFAIR Cloud Analysis’. The service will be executed using the advanced INDIGO PaaS services on top of any ELIXIR Compute Platform cloud resource. Andrew Stubbs of Erasmus MC is the study’s coordinator: “ELIXIR-NL, ELIXIR-IT, and EMBL-EBI… Continue reading →

ELIXIR Annual Report 2017

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ELIXIR has released its Annual Report presenting the major achievements in 2017 and highlighting the effort of over 650 experts from across 21 ELIXIR Nodes. It shows the activities of ELIXIR Platforms, Use Cases, and ELIXIR Nodes in meeting the objectives of the current ELIXIR Scientific Programme and introduces the work towards the new Programming cycle (2019-2023). Read more.

ELIXIR-NL receives funding to coordinate data approaches of Dutch life science facilities

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NWO has announced that ELIXIR-NL will receive funding to coordinate the data approaches of life science facilities in the National Roadmap for Large-Scale Scientific Infrastructure. Professor Jaap Heringa, Head of the Dutch ELIXIR node, explains: “In 2016, the Permanent Committee marked ELIXIR-NL as one of the strategic life science infrastructures on the National Roadmap, acknowledging our coordinating role across the… Continue reading →

MolData2 Implementation Study: facilitating molecular studies of rare diseases

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The ELIXIR Implementation Study ‘MolData2’ has recently been completed. Friederike Ehrhart of Maastricht University: “We investigated the current status of genotype-phenotype databases for rare diseases. In addition, we developed tools to tackle some of the most urgent problems.” Watch the ELIXIR webinar on the Moldata2 Implementation Study Ehrhart: “This study was conducted by the Dutch and Spanish ELIXIR node, Maastricht… Continue reading →

ELIXIR-NL course: Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!

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Galaxy is an open, web-based platform for data-intensive biomedical research. On 17-19 October 2018, ELIXIR-NL and the BioSB research school will organise a Galaxy course ‘Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!’ The course is meant for biomedical & translational medicine researchers who are keen on bioinformatics and for educators in the ‘bio domain’ who would like… Continue reading →