This hands-on training workshop will introduce new users to Ingenuity Pathway Analysis (http://www.ingenuity.com/products/ipa) for the biological interpretation of ‘omic data, and provide additional information for inexperienced users of the system. The training will use an RNA-Seq data set as a case study. For example, the temporal transcriptional changes observed during the differentiation of mouse embryonic stem cells to cardiomyocytes. The course will also highlight the considerations when analysing and integrating other data types such as proteomics or metabolomics data, and will touch on the analysis of miRNA.
Date: February 17, 2015
Program: Course Topics:
Introduction to QIAGEN Sample to Insight and Ingenuity Pathway Analysis (IPA)
Uploading data and running a Core Analysis
Interpreting a Core Analysis
o Canonical Pathways Analysis
o Upstream Regulator Analysis
o Functional Analysis
o Molecular Network Analysis
Search & Pathway Building; Search & Explore case study
Comparison Analysis
Sharing & Collaboration
Best Practice Tips & Tricks
Overview of other IPA analysis tools
Course website: http://www.molmed.nl/
