Partek’s two-day workshop provides an introduction to analysis of high-throughput genomics data (next-generation sequencing (NGS) and microarrays), with particular emphasis on gene expression. Topics include: experimental design, processing of NGS data, alignment and mapping, exploratory data analysis, statistical analysis of high-throughput data, biological interpretation, pathway analysis, data integration (e.g. miRNA and gene expression), and data visualization. This workshop is intended for those with novice or intermediate data analysis skills, but requires a basic understanding of microarray and NGS technologies.
Date: March 24-25, 2015
Target audience: This workshop is intended for those with novice or intermediate data analysis skills but, requires a basic understanding of microarray and NGS technologies.
Program: Day 1: Microarray
9:30 – 10:30 Introduction to Data Analysis with Partek tools
10:30 – 10:45 break
10:45 – 12:00 Gene Expression Analysis
12:00 – 13:00 lunch break
13:00 – 13:45 MicroRNA to Gene Expression Integration
13:45 – 14:00 break
14:00 – 15:30 Data Visualization
Day 2: NGS
9:30 – 10:30 Introduction to NGS Data Analysis
10:30 – 11:00 break
11:00 – 12:30 NGS Workflow
12:30 – 13:30 lunch break
13:30 – 15:00 RNA-seq Analysis
Course website: http://www.molmed.nl/
